# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "ambiR" in publications use:' type: software license: MIT title: 'ambiR: Calculate AZTI’s Marine Biotic Index' version: 0.1.1 identifiers: - type: doi value: 10.32614/CRAN.package.ambiR - type: url value: https://github.com/niva-denmark/ambiR/ abstract: Calculate AZTI’s Marine Biotic Index - AMBI. The included list of benthic fauna species according to their sensitivity to pollution. Matching species in sample data to the list allows the calculation of fractions of individuals in the different sensitivity categories and thereafter the AMBI index. The Shannon Diversity Index H' and the Danish benthic fauna quality index DKI (Dansk Kvalitetsindeks) can also be calculated, as well as the multivariate M-AMBI index. Borja, A., Franco, J., Pérez, V. (2000) "A marine biotic index to establish the ecological quality of soft bottom benthos within European estuarine and coastal environments" . authors: - family-names: Murray given-names: Ciarán J. email: cjm@niva-dk.dk orcid: https://orcid.org/0000-0003-0260-2008 - family-names: Borja given-names: Ángel email: aborja@azti.es orcid: https://orcid.org/0000-0003-1601-2025 - family-names: Pouso given-names: Sarai email: spouso@azti.es orcid: https://orcid.org/0000-0003-3208-9882 - family-names: Muxika given-names: Iñigo email: imuxika@azti.es orcid: https://orcid.org/0000-0002-9181-3781 - family-names: Garmendia given-names: Joxe Mikel email: jgarmendia@azti.es orcid: https://orcid.org/0000-0002-9403-1777 preferred-citation: type: manual title: 'ambiR: R package implementing the AZTI Marine Biotic Index' authors: - family-names: Murray given-names: Ciarán J. email: cjm@niva-dk.dk orcid: https://orcid.org/0000-0003-0260-2008 - family-names: Borja given-names: Ángel email: aborja@azti.es orcid: https://orcid.org/0000-0003-1601-2025 - family-names: Pouso given-names: Sarai email: spouso@azti.es orcid: https://orcid.org/0000-0003-3208-9882 - family-names: Muxika given-names: Iñigo email: imuxika@azti.es orcid: https://orcid.org/0000-0002-9181-3781 - family-names: Garmendia given-names: Joxe Mikel email: jgarmendia@azti.es orcid: https://orcid.org/0000-0002-9403-1777 institution: name: NIVA Denmark address: Copenhagen, Denmark year: '2025' url: https://github.com/NIVA-Denmark/ambiR repository: https://niva-denmark.r-universe.dev repository-code: https://github.com/NIVA-Denmark/ambiR commit: 4e75b9ce5143fd8ea8b0108d9eba206b75ce0a95 url: https://niva-denmark.github.io/ambiR/ date-released: '2025-12-20' contact: - family-names: Murray given-names: Ciarán J. email: cjm@niva-dk.dk orcid: https://orcid.org/0000-0003-0260-2008